Ainley, D.G. and Hyrenbach, K.D. (unpublished data): Long- and short-term factors affecting seabird population trends in the California current system, 1985-2006.

Anderson, D.M., P.M. Glibert, J.M. Burkholder. 2002. Harmful algal blooms and eutrophication: nutrient sources, composition, and consequences. Estuaries 25:704-726.

Anderson, B.S., J.W. Hunt, B.M. Phillips, P.A. Nicely, V. de Vlaming, V. Connor, N. Richard, R.S. Tjeerdema. 2003. Integrated assessment of the impacts of agricultural drainwater in the Salinas River (California, USA). Environmental Pollution 124: 523-532.

Anderson, B.S., J.W. Hunt, B.M. Phillips, P.A. Nicely, M. Martin, R.S. Tjeerdema. 2004. Comparison of in situ and laboratory toxicity tests with the estuarine amphipod Eohaustorius estuarius. Archives of Environmental Contaminant. Toxicology 46:52-60.

Anderson, B.S., B.M. Phillips, J.W. Hunt, N. Richard, V. Connor, R.S. Tjeerdema. 2006. Evidence of pesticide impacts in the Santa Maria River watershed, California, USA. Environmental Toxicology and Chemistry 25(4):1160-1170.

Anderson D.M., J.M. Burkholder, W.P. Cochlan, P.M. Gilbert,C.J. Gobler, C.A. Heil, R.M. Kudela. M.L. Parsons, J.E.J. Rensel, D.W. Townsend, V.L. Trainer, G.A. Vargo. 2008. Harmful algal blooms and eutrophication: Examining linkages from selected coastal regions of the United States. Harmful Algae 8:39-53.

Andrady, A.L., S.H. Hamid, X. Hu, A. Torikai. 1998. Effects of increased solar ultraviolet radiation on materials. Journal of Photochemistry and Photobiology B: Biology 46(1-3):96-103.

Angliss, R.P. and B.M. Allen. 2009. Alaska marine mammal stock assessments 2008. U.S. Department of Commerce NOAA Technical Memorandum NMFS-AFSC-193. 269pp. Electronic document available here.

Armstrong, M.A., N. Ladizinsky, W.P. Cochlan, R.M. Kudela. 2007. Nitrogenous preference of toxigenic Pseudo-nitzschia australis (Bacillariophyceae) from field and laboratory experiments. Harmful Algae 6:206-217.

Arthur, C., J. Baker and H. Bamford (eds). 2009. Proceedings of the international research workshop on the occurrence, effects and fate of microplastic marine debris. Sept 9-11, 2008. NOAA Technical Memorandum NOS-OR&R-30. Electronic document available here.

Auster, P.J. and R.W. Langton. 1999. The effects of fishing on fish habitat. American Fisheries Society Symposium 22:150-187.

Barry, J. Cold Seep Communities. ONLINE. 1996. In: Guerrero J, Kvitek R G (eds.) Monterey Bay National Marine Sanctuary Site Characterization. Available here [June 1996].

Barry, J. P., H.G. Greene, D.L. Orange, C.H. Baxter, B.H. Robison, R.E. Kochevar, J.W. Nybakken, D.L. Reed, C.M. McHugh. 1996. Biologic and geologic characteristics of cold seeps in Monterey Bay, California. Deep Sea Research Part I: Oceanographic Research Papers 43:1739-1755.

Baskett, M.L., M.M. Yoklavich, M.S. Love. 2006. Predation, competition, and the recovery of overexploited fish stocks in marine reserves. Canandian Journal of Fisheries and Aquatic Science 63:1214-1229.

Beck, N.G. and K.W. Bruland. 2000. Diel biogeochemical cycling in a hyperventilating estuarine environment. Estuaries 23:177-187.

Berkeley, S.A., M.A. Hixon, R.J. Larson, M.S. Love. 2004. Fisheries sustainability via protection of age structure and spatial distribution of fish populations. Fisheries 29:23–32.

Black, N., R. Ternullo, M. Dahlheim. 2003. Killer whales have extremely high levels of PCBs and DDT. In: Ecosystem Observations for the Monterey Bay National Marine Sanctuary: 2003. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 28 pp. Electronic document available here.

Bricker, S.B., C.G. Clement, D.E. Pirhalla, S.P. Orlando, and D.R.G. Farrow. 1999. National estuarine eutrophication assessment: effects of nutrient enrichment in the nation’s estuaries. NOAA, National Ocean Service, Special Projects Office and the National Centers for Coastal Ocean Science. Silver Spring, MD: 71pp. Electronic document available here.

Bricker, S., B. Longstaff, W. Dennison, A. Jones, K. Boicourt, C. Wicks, J. Woerner. 2007. Effects of nutrient enrichment in the nation’s estuaries: a decade of change. NOAA Coastal Ocean Program Decision Analysis Series No. 26. National Centers for Coastal Ocean Science, Silver Spring, MD. Electronic document available here.

Broenkow, W.W. and L.C. Breaker. 2005. A 30-Year history of tide and current measurements in Elkhorn Slough, California (November 18, 2005). Scripps Institution of Oceanography Library. Paper 8. Electronic document available here.

Byers, J. E. 1999. The distribution of an introduced mollusc and its role in the long-term demise of a native confamilial species. Biological Invasions 1(4):339-353.

Byers, J. 2000. A battle between snails elucidates details of biological invasion. In: Ecosystem Observations for the Monterey Bay National Marine Sanctuary: 2000. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 28 pp. Document available here.

Caffrey, J. 2002. Biogeochemical cycling. Pages 215-236 In: Caffrey, J., M. Brown, W.B. Tyler, M. Silberstein (eds.) Changes in a California Estuary. Elkhorn Slough Foundation, Moss Landing, California.

Caffrey, J. and W. Broenkow. 2002. Hydrography. Pages 29-42 In: Caffrey, J., M. Brown, W.B. Tyler, M. Silberstein (eds.) Changes in a California Estuary. Elkhorn Slough Foundation, Moss Landing, California.

Caffrey, J., M. Brown, W.B. Tyler, M. Silberstein. 2002. Changes in a California estuary: a profile of Elkhorn Slough. Moss Landing, California: Elkhorn Slough Foundation, Moss Landing, California. 280pp.

Calambokidis, J., and J. Barlow. 1991. Chlorinated hydrcarbon concentrations and their use for describing population discreteness in harbor porpoises from Washington, Oregon, and California. In J. E. I. Reynolds and D. K. Odell, editors. Marine mammal strandings in the United States: proceedings of the Second Marine Mammal Stranding Workshop; 3-5 December 1987, Miami, Florida. NOAA Technical Report-NMFS 98:101-110.

Calambokidis, J., T. Chandler, E. Falcone, A. Douglas. 2004. Research on large whales off California, Oregon and Washington in 2003. Contract Report to Southwest Fisheries Science Center, P.O. Box 271, La Jolla, CA 92038. 48p.

Carlisle, A., A. King, G.M. Cailliet, J.S. Brennan. 2007. Long-term trends in catch composition from elasmobranch derbies in Elkhorn Slough, California. Marine Fisheries Review 69:25-45.

Carr, M.H., P.T. Raimondi, S.I. Lonhart, M. Readdie, K. Kusic, R. Gaddam, H. Livingston, D. Malone. 2006. Informing decision-making for the coastal highway management plan: a biological sensitivity assessment for intertidal and shallow subtidal habitats on the Big Sur Coast. A report submitted to the Monterey Bay National Marine Sanctuary, Sanctuary Integrated Monitoring Network (SIMoN) and Monterey Bay Sanctuary Foundation. 188 pp. Electronic document available here.

Carretta, J.V., K.A. Forney, M.S. Lowry, J. Barlow, J. Baker, D. Johnston, B. Hanson, M.M. Muto, D. Lynch, L. Carswell. 2008. U.S. Pacific marine mammal stock assessments: 2008. U.S. Department of Commerce NOAA Technical Memorandum NMFS-SWFSC-434. 340pp. Electronic document available here.

CCLEAN. 2006. Central coast long-term environmental assessment network: 2004-2005 Annual Report. Submitted to the California Regional Water Quality Control Board, CCLEAN, Santa Cruz, CA. 125 pp. Electronic document available here.

CCLEAN. 2007. Central coast long-term environmental assessment network: 2001-2006 Program Overview. Submitted to the California Regional Water Quality Control Board, CCLEAN, Santa Cruz, CA. 177 pp. Electronic document available here.

CCLEAN. 2009. Central coast long-term environmental assessment network: 2007-2008 Annual Report. Submitted to the California Regional Water Quality Control Board, CCLEAN, Santa Cruz, CA. 47 pp. Electronic document available here.

CDFG (California Department of Fish and Game). 1961. California Ocean Fisheries Resources to the Year 1960. California Department of Fish and Game. 79 pp.

CDFG (California Department of Fish and Game). 2007. California marine life protection act initiate: regional profile of the north central coast study region (Alder Creek/ Point Arena to Pigeon Point, California). Electronic document available here.

CDFG (California Department of Fish and Game). 2008a. Final California Commercial Landings for 2007. Electronic document available here.

CDFG (California Department of Fish and Game). 2008b. Review of some California fisheries for 2007: coastal pelagic finfish, market squid, Dungeness crab, California spiny lobster, highly migratory species, ocean salmon, groundfish, California halibut, hagfish, Pacific herring, and recreational. CalCOFI Reports 49:15-38. Electronic document available here.

Chapin, T.P., J.M. Caffrey, H.W. Jannasch L.J. Coletti, J.C. Haskins, K.S. Johnson. 2004. Nitrate sources and sinks in Elkhorn Slough, California: Results from long-term continuous in situ nitrate analyzers. Estuaries 27:882-894.

Chavez F.P., J. Ryan, S.E. Lluch-Cota, C.M. Niquen. 2003. From anchovies to sardines and back: multidecadal change in the Pacific Ocean. Science 299:217-221.

CIMT (Center for Integrated Marine Technologies). 2006. Harmful Algal Blooms Fact Sheet. Electronic document available here.

CIWMB (California Integrated Waste Management Board). 2004. Use and Disposal of Polystyrene. In: California: A Report to the California Legislature. Integrated Waste Management Board, Sacramento, CA. Electronic document available here.

Cloern, J.E. 2001. Our evolving conceptual model of the coastal eutrophication problem. Marine Ecology Progress Series 210: 223-253.

Coastal Armoring and Bluff Erosion GIS [CD-ROM]. (2005) San Francisco, CA: California Coastal Commission. Available: California Coastal Commission/August 2005 [June 11, 2007].

Cochlan W.P., J. Herdon, R.M. Kudela. 2008. Inorganic and organic nitrogen uptake by the diatom Psuedo-nitzchia australis (Bacillariophyceae). Harmful Algae 8:111-118.

Conley, G.C., B. Hoover, S. DeBeukelaer. 2008. Central coast water quality data assessment. Technical report for the Monterey Bay National Marine Sanctuary. 176 pp. Electronic document available here.

Cope, J.M and A.E. Punt. 2005. Status of cabezon (Scorpaenichthys marmoratus) in California waters as assessed in 2005, School of Aquatic and Fishery Sciences, University of Washington, Seattle, Washington. Electronic document available here.

de Marignac, J., J. Hyland, J. Lindholm, A. DeVogelaere, W.L. Balthis, D. Kline. 2009. A comparison of seafloor habitats and associated benthic fauna in areas open and closed to bottom trawling along the central California continental shelf. Marine Sanctuaries Conservation Series ONMS-09-02. U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Office of National Marine Sanctuaries, Silver Spring, MD. 44 pp. Electronic document available here.

Dean, E. 2003. Tidal scour in Elkhorn Slough, California: A bathymetric analysis. B.S. Capstone Project, California State University, Monterey Bay, California. Electronic document available here.

Derraik, J.G. 2002. The pollution of the marine environment by plastic debris: a review. Marine Pollution Bulletin 44(9):842-852.

DeVogelaere, A.P., M. Jacobi, R. Walder, M. Foster. 1999. A summary of rocky shore monitoring projects in the Monterey Bay National Marine Sanctuary. Final report to the California Urban Environmental Research and Education Center. No. 51-33-017-009. Electronic document available here.

Doney, S.C. 2006. The dangers of ocean acidification. Scientific American 294(3):58-65.

Dorn, M.W. 2002. Advice on west coast rockfish harvest rates from Bayesian meta-analysis of stock-recruit relationships. North American Journal of Fisheries Management 22:280-300.

Dugan, J.E., G. Ichikawa, M. Stephenson, D.B. Crane, J. McCall, K. Regalado. 2005. Monitoring of coastal contaminants using sand crabs, Final Report prepared for Central Coast Regional Water Quality Control Board. 38 pp. Electronic document available here.

Dugan, J.E., D.M. Hubbard, I.F. Rodil, D.L. Revell, S. Schroeter. 2008. Ecological effects of coastal armoring on sandy beaches. Marine Ecology 29:160–170.

ESNERR (Elkhorn Slough National Estuarine Research Reserve), National Oceanic and Atmospheric Administration’s Estuarine Reserves Division, California Department of Fish and Game. 2009 Elkhorn Slough National Estuarine Research Reserve Final Management Plan 2007-2011. 339 pp. Electronic document available here.

ESTWPT (Elkhorn Slough Tidal Wetland Project Team). 2007. Elkhorn Slough tidal Wetland strategic plan. A report describing Elkhorn Slough’s estuarine habitats, main impacts, and broad conservation and restoration recommendations. 100 pp. Electronic document available here.

Engel J. and R. Kvitek 1998. Effects of otter trawling on a benthic community in Monterey Bay National Marine Sanctuary. Conservation Biology 12: 1204-1214.

Etnoyer, P. and L. Morgan. 2003. Occurrences of habitat-forming deep sea corals in the northeast Pacific ocean. A report to NOAA's Office of Habitat Conservation. Marine Conservation Biology Institute. Electronic document available here.

Field, J.C., K. Baltz, A.J. Phillips, W.A. Walker. 2007. Range expansion and trophic interactions of the jumbo squid, Dosidicus gigas, in the California Current. CalCOFI Reports 48:131-146.

Field, J. 2008. Jumbo squid (Dosidicus gigas) invasions in the Eastern Pacific Ocean. CalCOFI Reports 49:79-81.

Finkelstein, M., B. S. Keitt, D. A. Croll, B. Tershy, W. M. Jarman, S. Rodriguez-Pastor, D. J. Anderson, P. R. Sievert, D. R. Smith. 2006. Albatross Species Demonstrate Regional Differences In North Pacific Marine Contamination. Ecological Applications 16:678–686.

Finkelstein, M.E., K.A. Grasman, D.A. Croll, B.R. Tershy, B.S. Keitt, W.M. Jarman, D.R. Smith. 2007. Contaminant-associated alteration of immune function in Black-Footed Albatross (Phoebastria nigripes), North Pacific predator. Environmental Toxicology and Chemistry 26(9):1896-1903.

Forney, K.A., S.R. Benson, G.A. Cameron. 2001. Central California gillnet effort and bycatch of sensitive species, 1990-1998. Pp 141-160 In: E.F. McIvin and J. Parrish (eds.) Seabird Bycatch: Trends, Roadblocks, and Solutions. University of Alaska Sea Grant AK-SG-01-01, Fairbanks, Alaska. Electronic document available here.

Fritz, L., M.A. Quilliam, J.L.C. Wright, A.M. Beale, T.M. Work. 1992. An outbreak of domoic acid poisoning attributed to the pennate diatom Pseudonitzschia australis. Journal of Phycology 28:439-442.

Froescheis, O., R. Looser, G.M. Cailliet, W.M. Jarman, K. Ballschmiter. 2000. The deep-sea as a final global sink of semivolatile persistent organic pollutants? Part I: PCBs in surface and deep-sea dwelling fish of North and South Atlantic and the Monterey Bay Canyon (California). Chemosphere 40:651-660.

George, A. 2008. Mole crab decline. Bay Nature. Electronic document available here.

Gilbert, P.M., S. Seitzinger, C.A. Heil, J.M. Burkholder, M.W .Parrow, L.A. Codispoti, V. Kelly. 2005. The role of eutrophication in the global proliferation of harmful algal blooms: new perspectives and new approaches. Oceanography 18:198-209.

Goericke, R., E. Venrick, T. Koslow, W.J. Sydeman, F.B. Schwing, S.J. Bograd, W.T. Peterson, R.L. Emmett, J.R. Lara, G. Gaxiola Castro, J. Gómez Valdez, K.D. Hyrenbach, R.W. Bradley, M.J. Weise, J.T. Harvey, C. Collins, N.C.H. Lo. 2007. The state of the California current, 2006-2007: Regional and local processes dominate. CalCOFI Reports 48:33-66.

Goffredi, S.K., C.K. Paull, K. Fulton-Bennett, L.A. Hurtado, R.C. Vrijenhoek. 2004. Unusual benthic fauna associated with a whale fall in Monterey Canyon, California. Deep Sea Research 51:1295-1306.

Goldstein, T., S.P. Johnson, A.V. Phillips, K.D. Hanni, D. A. Fauquier, F.M.D. Gulland. 1999. Human-related injuries observed in live stranded pinnipeds along the central California coast 1986-1998. Aquatic Mammals 25:43-51.

Griggs, G.B. 1999. The protection of California's coast: past, present and future. Shore and Beach 67(1):18-28.

Griggs, G.B. 2005. The impacts of coastal armoring. Shore and Beach 73(1):13-22.

Griggs, G.B., K. Patsch, L. Savoy. 2005. Living with the Changing California Coast. University of California Press. Berkeley, CA. 551 pp.

Haaker, P.L., I. Taniguchi, J.K. O’Leary, K. Karpov, M. Patyten, M. Tegner. 2004. Abalones. Chapter 8 In: California Department of Fish and Game Annual Status of the Fisheries Report Through 2003. 182 pp. Electronic document available here.

Hankin, D., R.W. Warner, P. Collier, C. Ryan. 2004. Dungeness crab. Chapter 6 In: California Department of Fish and Game Annual Status of the Fisheries Report Through 2003. 182 pp. Electronic document available here.

Hanni, K. D. and P. Pyle. 2000. Entanglement of pinnipeds in synthetic materials at South-east Farallon Island, California, 1976-1998. Marine Pollution Bulletin 40:1076-1081.

Hapke, C.J., D. Reid, B.M. Richmond, P. Ruggiero, J. List. 2006. National assessment of shoreline change part 3; historical shoreline change and associated coastal land loss along sandy shorelines of the California coast. USGS Open-File Report 2006-1219. Electronic document available here.

Hardin, D., B. Bemis, C. Dominik, K. Starzel, D. Paradies. 2007. Literature review to characterize environmental contaminants that may affect the southern sea otter. A report submitted to the Monterey Bay National Marine Sanctuary, Sanctuary Integrated Monitoring Network (SIMoN) and Monterey Bay Sanctuary Foundation. 52 pp. Electronic document available here.

Hartwell, S.I. 2008. Distribution of DDT and other persistent organic contaminants in canyons and on the continental shelf of the central California coast. Marine Environmental Research 65:199-217.

Harvey, J. and S. Connors. 2002. Birds and mammals. Pages 188-214 In: Caffrey, J., M. Brown, W.B. Tyler, M. Silberstein (eds.) Changes in a California Estuary. Elkhorn Slough Foundation, Moss Landing, California.

Harvey, C.J., N. Tolimieri, P.S. Levin. 2006. Changes in body size, abundance, and energy allocation in rockfish assemblages of the northeast Pacific. Ecological Applications 16:1502-1515.

Heiman, K.W. 2006. Hard substrates as a limiting resource structuring invaded communities within a central California estuary. Ph.D. Dissertation, Stanford University. 137pp.

Heiman, K.W., N. Vidargas, F. Micheli. 2008. Non-native habitat as home for non-native species: comparison of communities associated with invasive tubeworm and native oyster reefs. Aquatic Biology 2:47-56.

Heisler J., P.P. Gilbert, J.M. Burkholder, D.M. Anderson, W. Cochlan, W.C. Dennison, Q. Dortch, C.J. Gobler, C.A. Jeil, E. Humphries, A. Lewitus, R. Magnien, H.G. Marshall, K. Sellner, D.A. Stockwell, D.K. Stoeker, M. Suddleson. 2008. Eutrophication and harmful algal blooms: a scientific consensus. Harmful Algae 8:3-13.

Howard M., W.P. Cochlan, N. Ladzinsky, R.M. Kudela. 2006. Evaluation of California isolates of Lingulodinium polyedrum for the production of yessotoxin. African Journal of Marine Science 28(2)399-402.

Howarth, R.W. 2008. Coastal nitrogen pollution: a review of sources and trends globally and regionally. Harmful Algae 8:14-20.

Hsieh, C.-h., C.S. Reiss, R.P. Hewitt, G. Sugihara. 2008. Spatial analysis shows that fishing enhances the climatic sensitivity of marine fishes. Canadian Journal of Fisheries and Aquatic Sciences 65:947-961.

Hunt, J.W., B.S. Anderson, B.M. Phillips, R.S. Tjeerdema, H.M. Puckett, V. De Vlaming. 1999. Patterns of aquatic toxicity in an agriculturally dominated coastal watershed in California. Agriculture Ecosystems and Environment 75:75-91.

Hunt J.W., B.S. Anderson, B.M. Phillips, P.A. Nicely, R.S. Tjeerdema, H.M. Puckett, M. Stephenson, K. Worcester, V. deVlaming. 2003. Ambient toxicity due to chlorpyrifos and diazinon in a Central California Watershed. Environmental Monitoring and Assessment 82: 83-112.

HSCSFBR (Harbor Safety Committee of the San Francisco Bay Region). 2007. 1998-2007 Harbor Safety Plans. San Francisco, San Pablo and Suisun Bays Harbor Safety Plan. Electronic data available here.

Hyrenbach, K. D. and R.R. Veit. 2003. Ocean warming and seabird communities of the California Current System: response at multiple temporal scales. Deep-Sea Research II 50:2537-2565.

Inderjit, C., D. Ranelletti, S. Kaushik. 2006. Invasive marine algae: an ecological perspective. The Botanical Review 72:153-178.

Jagielo, T.H. and F.R. Wallace. 2005. Assessment of Lingcod (Ophiodon elongatus) for the Pacific Fishery Management Council in 2005. In: Status of the Pacific Coast groundfish fishery through 2005, stock assessment and fishery evaluation: stock assessments and rebuilding analyses. Washington Department of Fish and Wildlife, Montesano, WA. Electronic document available here.

Jarman, W.M., K.A. Hobson, W.J. Sydeman, C.E. Bacon, E.B. McLaren. 1996. Influence of trophic position and feeding location on contaminant levels in the Gulf of the Farallones food web revealed by stable isotope analysis. Environmental Science & Technology 30:654-660.

Jessup, D.A., M.A. Miller, J.P. Ryan, H.M. Nevins, H.A. Kerkering, A. Mekebri, D.B. Crane, T.A. Johnson, R.M. Kudela. 2009. Mass stranding of marine birds caused by a surfactant-producing red tide. PLoS ONE 4:e4550. Electronic document available here.

Jester, R.J. 2008. An investigation into the prevalence of Alexandrium derived toxins in marine food webs. Ph.D. Dissertation, University of California. Santa Cruz, CA. 116pp.

Johnson, K.S., J.A. Needoba, S.C. Riser, W.J. Showers. 2007. Chemical sensor networks for the aquatic environment. Chemical Reviews 107(2):623–640.

Kannan, K., N. Kajiwara, B.J. LeBoeuf, S. Tanabe. 2004. Organochlorine pesticides and polychlorinated biphenyls in California sea lions. Environmental Pollution 131:425-434.

Kannan, K., E. Perrotta, N. Thomas. 2006. Association between perfluorinated compounds and pathological conditions in southern sea otters. Environmental Science and Technology 40:4943-4948. Electronic document available here.

Kim, S., J. Oakden, J. Oliver, J. Harvey. 2006. Ecological effects of the Moss Landing Power Plant thermal discharge. A report submitted to the Monterey Bay National Marine Sanctuary, Sanctuary Integrated Monitoring Network (SIMoN) and Monterey Bay Sanctuary Foundation. 112 pp. Electronic document available here.

Kimbrough, K.L., W.E. Johnson, G.G. Lauenstein, J.D. Christensen, D.A., Apeti. 2008. An assessment of two decades of contaminant monitoring in the nation’s coastal zone. Silver Spring, MD. NOAA Technical Memorandum NOS NCCOS 74 105pp. Electronic document available here.

Kogan, I., C.K. Paull, L.A. Kuhnz, E.J. Burton, S. Von Thun, H.G. Greene, J.P. Barry. 2006. ATOC/Pioneer Seamount cable after 8 years on the seafloor: Observations, environmental impact. Continental Shelf Research 26:771-787.

Krahn, M.M., M.B. Hanson, R.W. Baird, R.H. Boyer, D.G. Burrows, C.K. Emmons, J.K.B. Ford, L.L. Jones, D.P. Noren, P.S. Ross, G.S. Schorr, T.K. Collier. 2007. Persistent organic pollutants and stable isotopes in biopsy samples (2004/2006) from Southern Resident killer whales. Marine Pollution Bulletin 54:1903–1911.

Kreuder, C., M.A. Miller, D.A. Jessup, L.J. Lowenstine, M.D. Harris, J.A. Ames, T.E. Carpenter, P.A. Conrad, J.A.K. Mazet. 2003. Patterns of mortality in southern sea otters (Enhydra lutris nereis) from 1998-2001. Journal of Wildlife Diseases 39:495-509.

Kreuder, C., M.A. Miller, L.J. Lowenstine, P.A. Conrad, T.E. Carpenter, D.A. Jessup, J.A.K. Mazet. 2005. Evaluation of cardiac lesions and risk factors associated with myocarditis and dilated cardiomyopathy in southern sea otters (Enhydra lutris nereis). American Journal of Veterinary Research 66:289-299.

Kudela, R.M. and F.P. Chavez. 2004. The impact of coastal runoff on ocean color during an El Niño year in central California. Deep-Sea Research II 5:1173-1185.

Kudela, R.M., W.P. Cochlan, A. Roberts. 2004. Spatial and temporal patterns of Pseudo-nitzschia spp. in central California related to regional oceanography. Harmful Algal Blooms 2002. Steidinger, K. et al. (Eds.). Intergovernmental Oceanographic Commission of UNESCO, pp. 347-349.

Kudela, R., G. Pitcher, T. Probyn, F. Figueiras, T. Moita, V. Trainer. 2005. Harmful Algal Blooms in coastal upwelling systems. Oceanography 18(2):184-197.

Kudela, R.M., J.Q. Lane, W.P. Cochlan. 2008a. The potential role of anthropogenically derived nitrogen in the growth of harmful algae in California, USA. Harmful Algae 8:103-110.

Kudela, R.M., J.P. Ryan, M.D. Blakely, L.Q. Lane, T.D. Peterson. 2008b. Linking the physiology and ecology of Cochlodinium to better understand harmful algal bloom events: a comparative approach. Harmful Algae 7:278-292.

Kvitek, R.G., M.A. Silberstein, J.S. Oliver, P.N. Slattery, C. Jong, J. Nybakken, B.S. Anderson, K. Finn. 1996. Persistence and change of infaunal invertebrate communities in the Elkhorn Slough. Elkhorn Slough National Estuarine Research Reserve. Unpublished Manuscript.

Ladizinsky, N. 2003. The influence of dissolved copper on the production of domoic acid by psuedo-nitzchia species in Monterey Bay, California: Laboratory Experiments and Field Observations. Master’s Thesis. California State University, Monterey Bay, CA, USA, 68pp.

Larson, M.L. and P.N. Reilly. 2008. Spot prawn: Status of the fisheries report: an update through 2006. California Department of Fish and Game. 153 pp. Electronic document available here.

Leet, W.S., C.M. Dewees, R. Klingbeil, and E.J. Larson (eds.). 2001. California's living marine resources: a status report. California Department of Fish and Game. Electronic document available here.

Levin, P.S. EE. Holmes, K.R. Piner, C.J. Harvey. 2006. Shifts in a Pacific Ocean fish assemblage: the potential influence of exploitation. Conservation Biology 20:1181-1190.

Lindholm, J., P.J. Auster, P.C. Valentine. 2004. Role of a large marine protected area for conserving landscape attributes of sand habitats on Georges Bank (NW Atlantic). Marine Ecology Progress Series 269:61-68.

Lindquist, D.C. 1998. The effects of erosion on the trophic ecology of fishes in Elkhorn Slough, CA. M.S. Thesis. Moss Landing Marine Laboratories and California State University, Hayward.

Lockwood, J.L., M.F. Hoopes, M.P. Marchetti. 2007. Invasion Ecology. Blackwell Publishing, Malden, MA.

Lonhart, S.I. and J.W. Tupen. 2001. New range records of 12 marine invertebrates: the role of El Niño and other mechanisms in Southern and Central California. Bulletin of the Southern California Academy of Sciences 100:238-248.

Los Huertos, M., L. Gentry, C. Shennan. 2003. Land Use and Water Quality on California's Central Coast: Nutrient Levels in Coastal Waterways. Center for Agroecology & Sustainable Food Systems. Research Briefs. Paper brief_no2. Electronic document available here.

Looser R., Froescheis O., Cailliet G.M., Jarman W.M., K. Ballschmiter. 2000. The deep-sea as a final global sink of semivolatile persistent organic pollutants? Part II: Organochlorine pesticides in surface and deep-sea dwelling fish of North and South Atlantic and the Monterey Bay Canyon (California). Chemosphere 40:661-670.

Luckenbach Trustee Council. 2006. S.S. Jacob Luckenbach and associated mystery oil spills final damage assessment and restoration plan/environmental assessment. Prepared by California Department of Fish and Game, National Oceanic and Atmospheric Administration, United States Fish and Wildlife Service, National Park Service. Electronic document available here.

MacGinitie, G. 1935. Ecological aspects of a California marine estuary. American Midland Naturalist 16:629-765.

Mallin, M.A., H.W. Paerl, J. Rudek, P.W. Bates. 1993. Regulation of estuarine primary production by watershed rainfall and river flow. Marine Ecology Progress Series 93:199-203.

Maloney E., R. Fairey, A. Lyman, K. Reynolds, M. Sigala. 2006. Introduced aquatic species in California open coastal waters. Final Report. California Department of Fish and Game. Office of Spill Prevention and Response. Sacramento, CA., 93 pp. Electronic document available here.

Malzone, C.M. 1999. Tidal scour and its relation to erosion and sediment transport in Elkhorn Slough. M.S. Thesis, Moss Landing Marine Laboratories, San Jose State University, CA. 73 pp.

Mason, J.E. 1998. Declining rockfish lengths in the Monterey Bay, California, recreational fishery, 1959-94. Marine Fisheries Review 6(3):15-28.

MBARI (Monterey Bay Aquarium Research Institute). 2006. Seeing the future in the stratified sea. Monterey Bay Aquarium Research Institute Annual Report. 65pp.

MBNMS Remote Sensing Data Coverage [map]. 1:1,300,000. Monterey Bay National Marine Sanctuary GIS Data [computer files]. Monterey, CA: NOAA, 2008. Using: ArcView [GIS software]. Version 9.3. Redlands, CA: Environmental Systems Research Institute, Inc., 1992-2008

MBNMS (Monterey Bay National Marine Sanctuary). 2005. Program activities for the Monterey Bay National Marine Sanctuary: Resource Protection. Ecosystem Observations of the Monterey Bay National Marine Sanctuary. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 28 pp. Electronic document available here.

MBNMS (Monterey Bay National Marine Sanctuary). 2006. Ecosystem Observations of the Monterey Bay National Marine Sanctuary. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 20 pp. Electronic document available here.

Michaels, D. 2006. Old oil removed from SS Palo Alto: Popular beach attraction was a death trap for wildlife. California Department of Fish and Game Office of Spill Prevention and Response The OSPR News 12(2):2-3. Electronic document available here.

Miller, M., E. Dodd, M. Ziccardi, D. Jessup, D. Crane, C. Dominik, R. Spies, D. Hardin. 2007. Persistent organic pollutant concentrations in southern sea otters (Enhydra lutris nereis): Patterns with respect to environmental risk factors and major causes of mortality. Report to the Central Coast Regional Water Quality Control Board, San Luis Obispo, CA. Electronic document available here.

Miner, C.M., J.M. Altstatt, P.T. Raimondi, T.E. Minchinton. 2006. Recruitment failure and shifts in community structure following mass mortality of black abalone limit its prospects for recovery. Marine Ecology Progress Series 327:107-117.

MLML (Moss Landing Marine Laboratories). 2006. Ecological effects of the Moss Landing powerplant thermal discharge. A report submitted to the Monterey Bay National Marine Sanctuary, Sanctuary Integrated Monitoring Network (SIMoN) and Monterey Bay Sanctuary Foundation. Electronic document available here.

MLPA (Marine Life Protection Act Central Coast Regional Stakeholder Group). 2005. California Marine Life Protection Act (MLPA) initiative regional profile of the Central Coast study region (Pigeon Point to Point Conception, CA). Draft Final (v.2.0). Electronic document available here.

Monismith, S., N. Jones, M. Bela, N. Nidzieko. 2005. Hydrodynamics and sediment dynamics in Elkhorn Slough. Report to the Monterey Bay Sanctuary Foundation. December 2005, 88pp. Electronic document available here.

Monterey County. 2002. 2001 Nitrate management survey results report. Monterey County Water Resources Agency Report. Salinas, CA. 59pp. Elecontric document available here.

Morgan, L. E. and R. Chuenpagdee. 2003. Shifting gears: addressing the collateral impacts of fishing methods in U.S. waters. Island Press Publication Services, Washington, D.C. Electronic document available here.

Morgan, L.E., P. Etnoyer, A.J. Scholz, M. Mertens, M. Powell. 2005. Conservation and management implications of deep-sea coral and fishing effort distributions in the Northeast Pacific Ocean. pp. 1171-1187. In: A. Freiwald and J. M. Roberts (eds.) Cold-water corals and ecosystems. Springer-Verlag Berlin Heidelberg.

National Marine Sanctuary: Seafloor Mapping Data Inventory [computer file]. Seaside, CA: California State University Monterey Bay, 2007.

Nevins, H.M., S.R. Benson, E.M. Phillips, J. de Marignac, A. DeVogelaere, J. Ames, J.T. Harvey. (in prep). Coastal Ocean Mammal and Bird Education and Research Surveys (BeachCOMBERS): a decade of beach surveys in the Monterey Bay National Marine Sanctuary, 1997-2007.

Nevins, H., D. Hyrenbach, C. Keiper, J. Stock, M. Hester, J. Harvey. 2005. Seabirds as indicators of plastic pollution in the North Pacific. Paper for Plastic Debris Rivers to the Sea Conference 2005.

Nevins, H., K. Newton, J.T. Harvey, S.T. Benson, A. DeVogelaere. 2003. BeachCOMBERS: Monitoring Changes in Oiling Rates of Beached Marine Birds in the Monterey Bay National Marine Sanctuary. Poster presentation at the Sanctuary Currents Symposium, Seaside, CA. Electronic document available here.

Nixon, S.W. 1992. Quantifying the relationship between nitrogen input and the productivity of marine ecosystems. Proceedings of Advancements in Marine Science Conference 5:57-83.

NMFS (National Marine Fisheries Service). 2004. Preliminary report on occurrences of structure-forming megafaunal invertebrates off the west coast of Washington, Oregon and California. National Marine Fisheries Service, Northwest Fisheries Science Center, Seattle, WA, August 2004. 42pp. Electronic document available here.

NMSP (National Marine Sanctuary Program). 2002. Monterey Bay State of the Sanctuary Report. 31pp.

NMSP (National Marine Sanctuary Program). 2004. A monitoring framework for the National Marine Sanctuary System. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 22 pp. Electronic document available here.

NOAA (National Oceanic and Atmospheric Administration). 2008a. Monterey Bay National Marine Sanctuary final management plan. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 426 pp + appendices. Electronic document available here.

NOAA (National Oceanic and Atmospheric Administration). 2008b. NOAA’s regulation of fishing in national marine sanctuaries. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 17pp. Elecontric document available here.

NRC (National Research Council). 2002. Effects of trawling and dredging on seafloor habitat. National Academy Press, Washington, D.C. 136 pp.

NRC (National Research Council). 2005. Marine mammal populations and ocean noise: determining when noise causes biologically significant effects. Committee on characterizing biologically significant marine mammal behavior. National Academies Press, Washington, D.C. 142 pp.

Oftedal, O., K. Ralls, M.T. Tinker, A. Green. 2007. Nutritional constraints on the southern sea otter in the Monterey Bay National Marine Sanctuary and a comparison to sea otter populations at San Nicolas Island, California and Glacier Bay, Alaska. Final Report to the Monterey Bay National Marine Sanctuary and Marine Mammal Commission. 249 pp. Electronic document available here.

Oxman, D.S. 1995. Seasonal abundance, movements, and food habits of harbor seals (Phoca vitulina richardsi) in Elkhorn Slough, California. M.S. Thesis. Moss Landing Marine Laboratories, Moss Landing, California.

Paddack, M.J. and Estes, J.A. 2000. Kelp forest fish populations in marine reserves and adjacent exploited areas of central California. Ecological Applications 10(3):855-870.

Palumbi, S. 2004. Why mothers matter. Nature 430:621-622.

Parkin, J.L. 1998. Ecology of breeding Caspian terns, Sterna caspia in Elkhorn Slough, California. M.S. Thesis, San Jose State University. 101pp.

Paull, C.K., H.G. Greene, W. Ussler III, P.J. Mitts. 2002. Pesticides as tracers of sediment transport through Monterey Canyon. Geo-Marine Letters 22:121-126

Paull, C.K., B. Schlining, W. Ussler III, J.B. Paduan, D. Caress, H.G. Greene. 2005. Distribution of chemosynthetic biological communities in Monterey Bay, California. Geology 33:85-88.

Peery, M.Z., L.A. Hall, J.T. Harvey, L.A. Henkel. 2008. Abundance and productivity of Marbled Murrelets off Central California During the 2008 Breeding Season. Final Report Submitted to California State Parks, 95 Kelly Avenue, Half Moon Bay, CA 94019. Electronic document available here.

Pennington, J.T., R. Michisaki, D. Johnston, F.P. Chavez. 2007. Ocean observing in the Monterey Bay National Marine Sanctuary: CalCOFI and the MBARI time series. A Report to the Monterey Bay National Marine Sanctuary. Electronic document available here.

PFMC (Pacific Fishery Management Council). 2005. Amendment 18 (bycatch mitigation program) Amendment 19 (essential fish habitat) to the Pacific coast groundfish fishery management plan for the California, Oregon and Washington groundfish fishery. In: Pacific Fishery Management Council (ed). 98 pp. Electronic document available here.

PFMC (Pacific Fishery Management Council). 2006. Council calls for most restrictive salmon season in history. Pacific Council News 30(1):1-2. Electronic document available here.

PFMC (Pacific Fishery Management Council). 2008. Council adopts most restrictive salmon season ever. Pacific Council News 32(1):1,17. Electronic document available here.

Phillips, B., M. Stephenson, M. Jacobi, G. Ichikawa, M. Silberstein, M. Brown. 2002. Land use and contaminants. Pages 237-257 In: Caffrey, J., M. Brown, W.B. Tyler, M. Silberstein (eds.) . Elkhorn Slough Foundation, Moss Landing, California.

Phillips, B.M., B.S. Anderson, J.W. Hunt, S. Huntley, R.S. Tjeerdema, N. Kapellas, K. Worcester. 2006. Solid-phase sediment toxicity identification evaluation in an agricultural stream. Environmental Toxicology and Chemistry 25:1671-1676.

Phillips, E., H. Nevins, C. Gibble, J. Harvey, D. Jessup. 2007. Puffin invasion 2007: summary of Horned Puffin (Fratercula corniculata) mortality event based on gross examination. Report to California Department of Fish and Game, Sacramento, CA. Electronic document available here.

PISCO (Partnership for Interdisciplinary Studies of Coastal Oceans). 2007. Fish data give managers new insights. Coastal Connections 6:4. Electronic document available here.

Porzio, D. and B. Brady. 2008. California market squid. Chapter 1 In: California Department of Fish and Game Status of the Fisheries Report: An Update Through 2006. 153 pp. Electronic document available here.

Price, D.W., K.W. Kizer, K.H. Hansgen. 1991. California’s paralytic shellfish poisoning prevention program 1927–89. J. Shellfish Res. 10 (1), 119–145.

PWA (Philip Williams & Associates). 1992. Elkhorn Slough tidal hydraulics erosion study. Report submitted to US Army Corps of Engineers San Francisco District, August 1992, 33pp. Electronic document available here.

PWA (Philip Williams & Associates) 2008. Coastal Regional Sediment Management Plan for Southern Monterey Bay. Prepared for Association of Monterey Bay Area Governments. Electronic document available here.

Pyle, P. 1999. Organochlorine concentrations, eggshell thickness, and hatchability in seabirds off central California. Colonial Waterbirds 22:376-381.

Raimondi, P.T., C.M. Wilson, R.F. Ambrose, J.M. Engle, T.E. Minchinton. 2002. Continued declines of black abalone along the coast of California: are mass mortalities related to El Niño events? Marine Ecology Progress Series 242:143-152

Research Planning Inc. 2006. Sensitivity of coastal environments to spilled oil: Central California Atlas. Prepared for Monterey Bay National Marine Sanctuary, California Department of Fish and Game, and Monterey Bay Sanctuary Foundation.

Ricker J. and S. Peters. 2006. Assessment of sources of bacterial contaminations at Santa Cruz County Beaches. County of Santa Cruz, Water Resources Program. 75pp. Electronic document available here.

Ricketts, E.F., J. Calvin, J.W. Hedgpeth, D.W. Phillips. 1985. Between Pacific tides, 5th edition. Stanford University Press, Stanford, California.

Ritter, A.F., K. Wasson, S.I. Lonhart, R.K. Preisler, A. Woolfolk, K.A. Griffith, S. Connors, K.W. Heiman. 2008. Ecological signatures of anthropogenically altered tidal exchange in estuarine ecosystems. Estuaries and Coasts 31:554–571.

RWQCB (Regional Water Quality Control Board). 2007. 2006 Management practice checklist update summary report. 60 pp. Electronic document available here.

Ryan, J.P, J.F.R Gower, S.A. King, W.P. Bissett, A.M. Fischer, R.M. Kudela, Z. Kolber, F. Mazzillo, E.V. Rienecker, F.P. Chavez. 2008. A coastal ocean extreme bloom incubator. Geophysical Research Letters 35: L12602.

Sagarin, R.D., R.F. Ambrose, B.J. Becker, J.M. Engle, J. Kido, S.F. Lee, C.M. Miner, S.N. Murray, P.T. Raimondi, D. Richards, C. Roe. 2007. Ecological impacts on the limpet Lottia gigantea populations: human pressure over a broad scale on island and mainland intertidal zones. Marine Biology 150:399-413.

Sampey, J. 2006. A bathymetric analysis of equilibrium potential within Elkhorn Slough, California. B.S. Capstone Project, California State University, Monterey Bay, CA. Electronic document available here.

Sax, D.F., J.J. Stachowicz, S.D. Gaines. 2005. Species invasions: Insight into ecology, evolution, and biogeography. Sinauer Associates, Inc. Sunderland, MA.

Scharffenberger, T. 1999. Elkhorn Slough watershed conservation plan. Prepared for the Elkhorn Slough Foundation and the Nature Conservancy. 58pp. Electronic document available here.

Scholin, C.A., F. Gulland, G.J. Doucette, S. Benson, M. Busman, F.P. Chavez, J. Cordaro, R. DeLong, A. DeVogelaere, J. Harvey, M. Haulena, K. Lefebvre, T. Lipscomb, S. Loscutoff, L.J. Lowenstine, R. Marin III, P.E. Miller, W.A. McLellan, P.D.R. Moeller, C.L. Powell, T. Rowles, P. Silvagni, M. Silver, T. Spraker, V. Trainer, F.M. Van Dolah. 2000. Mortality of sea lions along the central California coast linked to a toxic diatom bloom. Nature 403:80–84.

Schwemmer, R. 2005. Expeditions to the shipwreck Montebello. In: Ecosystem Observations of the Monterey Bay National Marine Sanctuary. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 28 pp. Electronic document available here.

Schwemmer, R. 2006a. USS Macon expedition 2006. In Ecosystem Observations of the Monterey Bay National Marine Sanctuary. U.S. Dept. of Commerce, National Oceanic and Atmospheric Administration, National Ocean Service. Silver Spring, MD. 20 pp. Electronic document available here.

Schwemmer, R. 2006b. California gold rush steamers shipwrecked in California’s national marine sanctuaries. Society for Historical Archaeology, Sacramento, CA.

Scofield, W.L. 1948. Trawling gear in California. California Department of Fish and Game, Fish Bulletin 72. Elecontric document available here.

Scofield, R.P. and D. Christie. 2002. Beach patrol records indicate a substantial decline in Sooty Shearwater (Puffinus griseus) numbers. Notornis 49(3):158-165.

Sigala, M., R. Fairey, M. Adams. 2007. Environmental condition of water, sediment, and tissue quality in central coast harbors under the surface water ambient monitoring program fiscal year 2002-2003. State Water Resources Control Board, California Environmental Protection Agency, Sacramento, CA. 200 pp. Electronic document available here.

SFEI (San Francisco Estuary Institute). 2007. The pulse of the estuary: monitoring and managing water quality in the San Francisco Estuary. SFEI Contribution 532. San Francisco Estuary Institute, Oakland, CA. 87pp. Electronic document available here.

Smith, S.O. and J. Hunter. 2003. Monterey Bay National Marine Sanctuary submerged cultural resources study: 2001, Report prepared by the Underwater Archaeological Consortium, San Luis Obispo, CA. 107 pp. Electronic document available here.

Stamski, R. 2005. The impacts of coastal protection structures in California’s Monterey Bay National Marine Sanctuary. Marine Sanctuaries Conservation Series MSD-05-3. U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Marine Sanctuaries Division, Silver Spring, MD. 18 pp. Electronic document available here.

Starr, R.M., J.M. Cope, L.A. Kerr. 2002. Trends in fisheries and fishery resources associated with the Monterey Bay National Marine Sanctuary From 1981-2000. Publication No. T-046, California Sea Grant College Program, La Jolla, California. 169 pp. Electronic document available here.

Starr, R.M., M.H. Carr, J. Caselle, J.A. Estes, C. Pomeroy, C. Syms, D.A. VenTresca, M.M. Yoklavich. 2004. A review of the ecological effectiveness of subtidal marine reserves in central California. Marine Sanctuaries Conservation Series MSD-04-02, U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Silver Spring, MD. 133 pp. Electronic document available here.

SWAMP (Surface Water Ambient Monitoring Program). 2005. Chemical concentrations in fish tissues from selected reservoirs and coastal areas in the San Francisco Bay region. Final Technical Report. Electronic document available here.

SWRCB (State Water Resource Control Board). 2006. 303(d) List of Water Quality Limited Segments. Electronic document available here.

Tanner, C. 2006. State of the central California marine ecosystem. Monterey Bay Aquarium Research Institute (MBARI) unpublished report. Electronic document available here.

Tenera Environmental. 2003. A comparative intertidal study and user survey, Point Pinos, California, ESLO2003-014, Tenera Environmental, San Luis Obispo, CA. Electronic document available here.

Terrell, B.G. 2007. Fathoming our past – historical contexts of the National Marine Sanctuaries. National Marine Sanctuary Program, Silver Spring, MD. Electronic document available here.

Tinker, M.T., J.A. Estes, K. Ralls, T.M. Williams, D. Jessup, D.P. Costa. 2006. Population dynamics and biology of the California sea otter (Enhydra lutris nereis) at the southern end of its range, MMS OCS Study 2006-007. Coastal Research Center, Marine Science Institute, University of California, Santa Barbara, California. MMS Cooperative Agreement Number 14-35-0001-31063. 253 pp. Electronic document available here.

U.S. Fish and Wildlife Service. 2003. Final revised recovery plan for the southern sea otter (Enhydra lutris nereis). Portland, Oregon. 165 pp. Electronic document available here.

Van Dyke, E. and K. Wasson. 2005. Historical ecology of a central California estuary: 150 Years of Habitat Change. Estuaries 28:173-189.

Wasson, K., C. Zabin, M. Diaz, L. Bedinger, J. Pearse. 2001. Biological invasions of estuaries without international shipping: the importance of intraregional transport. Biological Conservation 102:143–153.

Wasson, K., J. Nybakken, R. Kvitek, C. Braby, M. Silberstein. 2002. Invertebrates. Pages 135-162 In: J. Caffrey, M. Brown, W.B. Tyler, M. Silberstein (eds.) Changes in a California Estuary. Elkhorn Slough Foundation, Moss Landing, California.

Wasson, K., K. Fenn, J.S. Pearse. 2005. Habitat differences in marine invasions of central California. Biological Invasions 7:935-948.

Watters, D., M. Yoklavich, M. Love. 2008. Marine debris in deepwater benthic habitats off California: is there a problem? Poster at: Monterey Bay National Marine Sanctuary Currents Symposium, April 5, Monterey, California.

Wong, K. 2006. Mapping annual sediment change in the Monterey Canyon head using serial multibeam bathymetry surveys, Capstone Project Report. Seafloor Mapping Lab, California State University, Monterey Bay. Electronic document available here.

Yoklavich, M.M., G.M. Cailliet, J.P. Berry, D.A. Ambrose, B.S. Antrim. 1991. Temporal and spatial patterns in abundance and diversity of fish assemblages in Elkhorn Slough, California. Estuaries 14:465-480.

Yoklavich, M.M., H.G. Greene, G.M. Cailliet, D.E. Sullivan, R.N. Lea, M.S. Love. 2000. Habitat associations of deep-water rockfishes in a submarine canyon: an example of a natural refuge. Fishery Bulletin 98:625-641.

Yoklavich, M.M., G.M .Cailliet, D.S. Oxman, J.P. Barry, D.C. Lindquist. 2002. Fishes. Pages 163-187 In: J. Caffrey, M. Brown, W.B.Tyler, M. Silberstein (eds.) Changes in a California Estuary. Elkhorn Slough Foundation, Moss Landing, California.

Zabel, R. W., C. J. Harvey, S. L. Katz, T. P. Good, P. S. Levin. 2003. Ecologically Sustainable Yield. American Scientist 91:150-157.

Zabka, T., H. Nevins, E. Phillips. 2006. Summary of Red Phalarope (Phalaropus fulicaria) wreck based on gross examination. Report to California Department of Fish and Game, Sacramento, CA. Electronic document available here.

Zeidberg, L.D. and B.H. Robison. 2007. Invasive range expansion by the Humboldt squid, Dosidicus gigas, in the eastern North Pacific. Proceedings of the National Academy of Sciences 104:12948-12950.

Zimmerman, R.C. and J.M. Caffrey. 2002. Primary producers. Pages 118-134 In: J. Caffrey, M. Brown, W.B. Tyler, M. Silberstein (eds.) Changes in a California Estuary. Elkhorn Slough Foundation, Moss Landing, California.